Automatic segmentation for enhanced quantification of fungi in transgenic mice

Esther Klaile, Jan-Philipp Praetorius, Marc Thilo Figge, Hortense Slevogt

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  1. Klaile_PraetoriusEtAl
  2. code
  3. python
  4. deep-learning
  5. final_staining_models
model_black_fungus_cutOuts.csv 2 KB model_black_fungus_cutOuts_single.csv <1 KB model_black_fungus_patches.csv 1 KB model_black_fungus_patches_tiles.csv 52 KB model_red_fungus_cutOuts.csv 1 KB model_red_fungus_cutOuts_single.csv <1 KB model_red_fungus_patches.csv 1 KB model_red_fungus_patches_tiles.csv 45 KB predict_model.py 2 KB train_model_black.py 3 KB train_model_red.py 3 KB