Surrogate infection model predicts optimal alveolar macrophage number for clearance of Aspergillus fumigatus infections

Saffer C, Timme S, Rudolph P, Figge MT

Nature Systems Biology and Application

Open access

JIPipe: A graphical batch processing language for ImageJ

Ruman Gerst, Zoltán Cseresnyés,Marc Thilo Figge

Open access

Toxin-producing endosymbionts shield pathogenic fungus against micropredators.

Richter, I., Radosa, S., Cseresnyés, Z., Ferling, I., Büttner, H., Niehs, S.P., Gerst, R., Figge, M.T., Hillmann, Falk, Hertweck, C.

mBio xxx, xxx DOI: xxx

Open access

Bacterial endosymbionts protect beneficial soil fungus from nematode attack.

Büttner H*, Niehs SP*, Vandelannoote K, Cseresnyés Z, Dose B, Richter I, Gerst R, Figge MT, Stinear TP, Pidot SJ, Hertweck C

PNAS 118, 37.

Open access

Invasive aspergillosis-on-chip: A quantitative treatment study of human Aspergillus fumigatus infection.

Hoang, T. *, Cseresnyés, Z.*, Hartung, S.*, Blickensdorf, M., Saffer, C., Rennert, K., Mosig, A.S, von Lilienfeld-Toal, M.#+, Figge, M.T.#+

Biomaterials 283, 121420 DOI: https://doi.org/10.1016/j.biomaterials.2022.121420

Open access

Stealth Effect of Oligo(2-Ethyl-2-Oxazolines) in Graft Copolymers: Minor Changes of Backbone End Group Determine Cell-Type Specificity in the Liver.

Muljajew I*, Huschke S*, Ramoji A, Cseresnyés Z, Hoeppener S, Nischang I, Foo W, Popp J, Figge MT, Weber C, Bauer M, Schubert U, Press A

ACS Nano 15(7), 12298-313.

Open access

Enhanced segmentation of label-free cells for automated migration and interaction tracking

Belyaev I, Praetorius JP, Medyukhina A, Figge MT

Cytometry Part A

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Comparative assessment of immune evasion mechanisms in human whole-blood infection assays by a systems biology approach.

Lehnert T, Prauße MTE, Hünniger K, Praetorius JP, Kurzai O, Figge MT

PLoS One 16(4), e0249372

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Dynamic spherical harmonics approach for shape classification of migrating cells.

Medyukhina A*, Blickensdorf M*, Cseresnyés Z, Ruef N, Stein JV, Figge MT

Sci Rep 10(1), 6072.

Open access

Automated tracking of label-free cells with enhanced recognition of whole tracks

Al-Zaben N*, Medyukhina A*, Dietrich S, Marolda A, Hünniger K, Kurzai O, Figge MT

Sci Rep 9(1), 3317

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Predictive virtual infection modeling of fungal immune evasion in human whole blood.

Prauße MTE, Lehnert T, Timme S, Hünniger K, Leonhardt I, Kurzai O, Figge MT

Front Immunol 9, 560.

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Dimensionality of motion and binding valency govern receptor-ligand kinetics as revealed by agent-based modeling.

Lehnert T, Figge MT

Front Immunol 8, 1692.

Open access

Untangling cell tracks: Quantifying cell migration by time lapse image data analysis.

Svensson CM, Medyukhina A, Belyaev I, Al-Zaben N, Figge MT

Cytometry A 93(3), 357-370

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Hessian-based quantitative image analysis of host- pathogen confrontation assays

Cseresnyes Z*, Kraibooj K*, Figge MT

Cytometry A 93(3), 346-356

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Automated quantification of early bone alterations and pathological bone turnover in experimental arthritis by in vivo PET/CT imaging

Hoffmann B*, Svensson C-M*, Straßburger M, Gebser B, Irmler IM, Kamradt T, Saluz HP, Figge MT

Sci Rep 7, 2217

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Fully automated evaluation of total glomerular number and capillary tuft size in murine nephritic kidneys using lightsheet microscopy.

Klingberg A, Hasenberg A, Ludwig-Portugall I, Medyukhina A, Männ L, Brenzel A, Engel DR, Figge MT, Kurts C, Gunzer M

J Am Soc Nephrol 28(2), 452-459

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Segmentation of clusters by template rotation expectation maximization.

Svensson C-M, Bondoc K G, Pohnert G, Figge MT

Comput Vis Image Underst 152, 64-72.

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